Databases

CANDIDA ALBICANS

    •    Candida Genome Database

    •    Candida Sequencing at Stanford

    

SACCHAROMYCES CEREVISIAE

    •    Saccharomyces Genome Database

    •    Saccharomyces Genome Deletion Project

    •    Saccharomyces Cell Cycle Expression Database

    •    MIPS Yeast Genome Project

    •    Database of Interacting Proteins (DIP)

    •    NCRR Yeast Resource Center in Seattle

    •    Saccharomyces Transcriptional Regulatory Networks

    •    Chromatin Regulation of Gene Expression

    •    An Introduction to the Genetics and Molecular Biology of the Yeast Saccharomyces cerevisiae by Fred Sherman

 

OTHER ORGANISMS

    •    S. pombe Project at The Sanger Centre

    •    Chlamydomonas EST Database at Kazusa

    •    The Plasmodium Genome Resource 

 

NUCLEIC ACID

    •    GenBank at NCBI

    •    TRANSFAC Database

    •    GenomeNet WWW Server at Kyoto

    •    Eukaryotic Promoter Database

    •    MIRAGE Database at IFTI

    •    ORF finder

    •    RNA & DNA folding apps (mfold, etc.) 

 

PROTEIN

    •    ExPASy (PROSITE, SWISS-PROT, etc.)

    •    Protein Data Bank at RCSB

    •    Histone Database

    •    UMBER DbBrowser (PRINTS, OWL, etc.)

    •    PhosphoBase

    •    SBASE protein domain library

    •    OGlycBase

    •    BioMagResBank

    •    Protein-Protein Interaction Prediction

    •    Database of Interacting Proteins (DIP)

 

REFERENCES

    •    Entrez-PubMed

    •    PubCrawler

    •    Biological Journals and Abbreviations

    •    OVID

    •    Cell Biology WWW Virtual Library

    •    Cytokines Online Pathfinder Encyclopaedia

    •    BIOSCI Electronic Newsgroup Network

 

PAIRWISE ALIGNMENT

    •    BLAST

    •    BLAST 2 Sequences

    •    Sequence Manipulation Suite

 

MULTIPLE ALIGNMENT

    •    EMBL Computational Services (SMART, SRS5, etc.)

 

METHODS & REAGENTS

    •    Michael-Christopher Keogh's Protocols

    •    Protocol Online

    •    Antibody Resource Page

    •    ABcam

    •    NIST Chemistry WebBook